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GrainGenes Probe Report: TraesCS2B01G190100

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	TraesCS2B01G190100
Locus	TraesCS2B01G190100.1
URL	[ Hide all but 1 of 27 ] Pfam PF00270 Pfam PF00271 Pfam PF04408 Pfam PF07717 Pfam PF01485 InterPro IPR000504 InterPro IPR001650 InterPro IPR001841 InterPro IPR002464 InterPro IPR002867 InterPro IPR004088 InterPro IPR007502 InterPro IPR011545 InterPro IPR011709 InterPro IPR013083 InterPro IPR013087 InterPro IPR014001 InterPro IPR017907 InterPro IPR027417 Gene Ontology GO:0003676 Gene Ontology GO:0003723 Gene Ontology GO:0004386 Gene Ontology GO:0005515 Gene Ontology GO:0005524 Gene Ontology GO:0008026 Gene Ontology GO:0008270 Gene expression at wheat-expression.com (expVIP)
Reference	IWGSC et al. (2018) Shifting the limits in wheat research and breeding using a fully annotated reference genome Science 361.
General Remarks	BLAST Hit Accession: tr|B9S9D0|B9S9D0_RICCO Human Readable Description: ATP-dependent RNA helicase, putative Pfam IDs Description: PF00270: DEAD/DEAH box helicase; PF00271: Helicase conserved C-terminal domain; PF04408: Helicase associated domain (HA2); PF07717: Oligonucleotide/oligosaccharide-binding (OB)-fold; PF01485: IBR domain, a half RING-finger domain InterPro IDs Description: IPR000504: RNA recognition motif domain; IPR001650: Helicase, C-terminal; IPR001841: Zinc finger, RING-type; IPR002464: DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site; IPR002867: IBR domain; IPR004088: K Homology domain, type 1; IPR007502: Helicase-associated domain; IPR011545: DEAD/DEAH box helicase domain; IPR011709: Domain of unknown function DUF1605; IPR013083: Zinc finger, RING/FYVE/PHD-type; IPR013087: Zinc finger C2H2-type; IPR014001: Helicase superfamily 1/2, ATP-binding domain; IPR017907: Zinc finger, RING-type, conserved site; IPR027417: P-loop containing nucleoside triphosphate hydrolase GO IDs Description via InterPro: GO:0003676 MF: nucleic acid binding; GO:0003723 MF: RNA binding; GO:0004386 MF: helicase activity; GO:0005515 MF: protein binding; GO:0005524 MF: ATP binding; GO:0008026 MF: ATP-dependent helicase activity; GO:0008270 MF: zinc ion binding
Type	Genomic
Sequence	TraesCS2B01G190100.1
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring