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GrainGenes Probe Report: HORVU.MOREX.r2.UnG0635170

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
HORVU.MOREX.r2.UnG0635170
Locus
HORVU.MOREX.r2.UnG0635170.1
URL
Gene Ontology GO:0005509
[ Show all 11 ]
Reference
ReferenceMonat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks
[ Hide all but 1 of 13 ]
Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database).
Functional annotation published with the genome: FGGY family of carbohydrate kinase
GO:0005509; molecular_function; calcium ion binding
GO:0005886; cellular_component; plasma membrane
GO:0005887; cellular_component; integral component of plasma membrane
GO:0007155; biological_process; cell adhesion
GO:0007156; biological_process; homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007268; biological_process; chemical synaptic transmission
GO:0007416; biological_process; synapse assembly
GO:0016020; cellular_component; membrane
GO:0016021; cellular_component; integral component of membrane
GO:0042802; molecular_function; identical protein binding
GO:0046872; molecular_function; metal ion binding
Type
Genomic
Sequence
HORVU.MOREX.r2.UnG0635170.1
Source Species
Hordeum vulgare
Source Germplasm
Morex (barley)