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GrainGenes Probe Report: HORVU.MOREX.r2.7HG0622980

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.7HG0622980
Locus	HORVU.MOREX.r2.7HG0622980.1
URL	Gene Ontology GO:0000166 [ Show all 28 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 30 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: disease resistance family protein / LRR family protein GO:0000166; molecular_function; nucleotide binding GO:0003676; molecular_function; nucleic acid binding GO:0003677; molecular_function; DNA binding GO:0003723; molecular_function; RNA binding GO:0003824; molecular_function; catalytic activity GO:0003887; molecular_function; DNA-directed DNA polymerase activity GO:0003964; molecular_function; RNA-directed DNA polymerase activity GO:0004190; molecular_function; aspartic-type endopeptidase activity GO:0004518; molecular_function; nuclease activity GO:0004519; molecular_function; endonuclease activity GO:0004523; molecular_function; RNA-DNA hybrid ribonuclease activity GO:0005524; molecular_function; ATP binding GO:0005634; cellular_component; nucleus GO:0005737; cellular_component; cytoplasm GO:0006278; biological_process; RNA-dependent DNA biosynthetic process GO:0006310; biological_process; DNA recombination GO:0006508; biological_process; proteolysis GO:0008152; biological_process; metabolic process GO:0008233; molecular_function; peptidase activity GO:0015074; biological_process; DNA integration GO:0016740; molecular_function; transferase activity GO:0016779; molecular_function; nucleotidyltransferase activity GO:0016787; molecular_function; hydrolase activity GO:0032196; biological_process; transposition GO:0046872; molecular_function; metal ion binding GO:0071897; biological_process; DNA biosynthetic process GO:0090305; biological_process; nucleic acid phosphodiester bond hydrolysis GO:0090502; biological_process; RNA phosphodiester bond hydrolysis, endonucleolytic
Type	Genomic
Sequence	HORVU.MOREX.r2.7HG0622980.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)