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GrainGenes Probe Report: HORVU.MOREX.r2.7HG0620350

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.7HG0620350
Locus	HORVU.MOREX.r2.7HG0620350.1
URL	Gene Ontology GO:0003854 [ Show all 10 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 12 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: F-box protein GO:0003854; molecular_function; 3-beta-hydroxy-delta5-steroid dehydrogenase activity GO:0006694; biological_process; steroid biosynthetic process GO:0016020; cellular_component; membrane GO:0016021; cellular_component; integral component of membrane GO:0016491; molecular_function; oxidoreductase activity GO:0016616; molecular_function; oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor GO:0047012; molecular_function; sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity GO:0055114; biological_process; oxidation-reduction process GO:0103066; molecular_function; 4alpha-carboxy-4beta-methyl-5alpha-cholesta-8-en-3beta-ol:NAD(P)+ 3-oxidoreductase (decarboxylating) activity GO:0103067; molecular_function; 4alpha-carboxy-5alpha-cholesta-8-en-3beta-ol:NAD(P)+ 3-dehydrogenase (decarboxylating) activity
Type	Genomic
Sequence	HORVU.MOREX.r2.7HG0620350.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)