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GrainGenes Probe Report: HORVU.MOREX.r2.7HG0619790

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.7HG0619790
Locus	HORVU.MOREX.r2.7HG0619790.1
URL	Gene Ontology GO:0000398 [ Show all 24 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 26 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Melanin-concentrating hormone receptor 1 GO:0000398; biological_process; mRNA splicing, via spliceosome GO:0003676; molecular_function; nucleic acid binding GO:0003723; molecular_function; RNA binding GO:0003729; molecular_function; mRNA binding GO:0003730; molecular_function; mRNA 3'-UTR binding GO:0005515; molecular_function; protein binding GO:0005634; cellular_component; nucleus GO:0005737; cellular_component; cytoplasm GO:0005829; cellular_component; cytosol GO:0007112; biological_process; male meiosis cytokinesis GO:0007140; biological_process; male meiotic nuclear division GO:0007268; biological_process; chemical synaptic transmission GO:0007283; biological_process; spermatogenesis GO:0007289; biological_process; spermatid nucleus differentiation GO:0008143; molecular_function; poly(A) binding GO:0009953; biological_process; dorsal/ventral pattern formation GO:0045314; biological_process; regulation of compound eye photoreceptor development GO:0045727; biological_process; positive regulation of translation GO:0048477; biological_process; oogenesis GO:0048599; biological_process; oocyte development GO:0071011; cellular_component; precatalytic spliceosome GO:0071013; cellular_component; catalytic step 2 spliceosome GO:1901215; biological_process; negative regulation of neuron death GO:1990904; cellular_component; ribonucleoprotein complex
Type	Genomic
Sequence	HORVU.MOREX.r2.7HG0619790.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)