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GrainGenes Probe Report: HORVU.MOREX.r2.7HG0618110

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.7HG0618110
Locus	HORVU.MOREX.r2.7HG0618110.1
URL	Gene Ontology GO:0000166 [ Show all 21 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 23 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: 30S ribosomal protein S5 GO:0000166; molecular_function; nucleotide binding GO:0000287; molecular_function; magnesium ion binding GO:0002224; biological_process; toll-like receptor signaling pathway GO:0004672; molecular_function; protein kinase activity GO:0004674; molecular_function; protein serine/threonine kinase activity GO:0005515; molecular_function; protein binding GO:0005524; molecular_function; ATP binding GO:0005634; cellular_component; nucleus GO:0005737; cellular_component; cytoplasm GO:0006468; biological_process; protein phosphorylation GO:0006915; biological_process; apoptotic process GO:0007049; biological_process; cell cycle GO:0016301; molecular_function; kinase activity GO:0016310; biological_process; phosphorylation GO:0016740; molecular_function; transferase activity GO:0019901; molecular_function; protein kinase binding GO:0032496; biological_process; response to lipopolysaccharide GO:0035556; biological_process; intracellular signal transduction GO:0043027; molecular_function; cysteine-type endopeptidase inhibitor activity involved in apoptotic process GO:0043154; biological_process; negative regulation of cysteine-type endopeptidase activity involved in apoptotic process GO:0045944; biological_process; positive regulation of transcription by RNA polymerase II
Type	Genomic
Sequence	HORVU.MOREX.r2.7HG0618110.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)