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GrainGenes Probe Report: HORVU.MOREX.r2.7HG0617110

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
HORVU.MOREX.r2.7HG0617110
Locus
HORVU.MOREX.r2.7HG0617110.1
URL
Gene Ontology GO:0003824
Gene Ontology GO:0004425
Gene Ontology GO:0006568
Gene Ontology GO:0008152
Reference
ReferenceMonat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks
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Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database).
Functional annotation published with the genome: NHL domain-containing protein, putative
GO:0003824; molecular_function; catalytic activity
GO:0004425; molecular_function; indole-3-glycerol-phosphate synthase activity
GO:0006568; biological_process; tryptophan metabolic process
GO:0008152; biological_process; metabolic process
Type
Genomic
Sequence
HORVU.MOREX.r2.7HG0617110.1
Source Species
Hordeum vulgare
Source Germplasm
Morex (barley)