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GrainGenes Probe Report: HORVU.MOREX.r2.7HG0614180

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
HORVU.MOREX.r2.7HG0614180
Locus
HORVU.MOREX.r2.7HG0614180.1
URL
Gene Ontology GO:0000387
[ Show all 8 ]
Reference
ReferenceMonat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks
[ Hide all but 1 of 10 ]
Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta).
Functional annotation published with the genome: 4-coumarate:CoA ligase
GO:0000387; biological_process; spliceosomal snRNP assembly
GO:0000398; biological_process; mRNA splicing, via spliceosome
GO:0003723; molecular_function; RNA binding
GO:0005634; cellular_component; nucleus
GO:0005681; cellular_component; spliceosomal complex
GO:0005732; cellular_component; small nucleolar ribonucleoprotein complex
GO:0006397; biological_process; mRNA processing
GO:0008380; biological_process; RNA splicing
Type
Genomic
Sequence
HORVU.MOREX.r2.7HG0614180.1
Source Species
Hordeum vulgare
Source Germplasm
Morex (barley)