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GrainGenes Probe Report: HORVU.MOREX.r2.7HG0606110

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.7HG0606110
Locus	HORVU.MOREX.r2.7HG0606110.1
URL	Gene Ontology GO:0004008 [ Show all 15 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 19 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta). Functional annotation published with the genome: Seed maturation protein LEA 4 The GO term GO:0004008 was intially assigned to this transcript and is now obsolete. It has been replaced by: GO:0043682 GO:0098655; biological_process; cation transmembrane transport The GO term GO:0099132 was intially assigned to this transcript and is now obsolete. It has been replaced by: GO:0098655 GO:0000166; molecular_function; nucleotide binding GO:0005524; molecular_function; ATP binding GO:0005886; cellular_component; plasma membrane GO:0006811; biological_process; ion transport GO:0006812; biological_process; cation transport GO:0006825; biological_process; copper ion transport GO:0016020; cellular_component; membrane GO:0016021; cellular_component; integral component of membrane GO:0016787; molecular_function; hydrolase activity GO:0019829; molecular_function; ATPase-coupled cation transmembrane transporter activity GO:0030001; biological_process; metal ion transport GO:0046872; molecular_function; metal ion binding GO:0060003; biological_process; copper ion export
Type	Genomic
Sequence	HORVU.MOREX.r2.7HG0606110.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)