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GrainGenes Probe Report: HORVU.MOREX.r2.7HG0605570

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.7HG0605570
Locus	HORVU.MOREX.r2.7HG0605570.1
URL	Gene Ontology GO:0002040 [ Show all 24 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 26 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta). Functional annotation published with the genome: Receptor kinase GO:0002040; biological_process; sprouting angiogenesis GO:0003723; molecular_function; RNA binding GO:0003727; molecular_function; single-stranded RNA binding GO:0005634; cellular_component; nucleus GO:0005654; cellular_component; nucleoplasm GO:0005730; cellular_component; nucleolus GO:0006325; biological_process; chromatin organization GO:0006351; biological_process; transcription, DNA-templated GO:0006355; biological_process; regulation of transcription, DNA-templated GO:0006397; biological_process; mRNA processing GO:0007275; biological_process; multicellular organism development GO:0008380; biological_process; RNA splicing GO:0016491; molecular_function; oxidoreductase activity GO:0018395; biological_process; peptidyl-lysine hydroxylation to 5-hydroxy-L-lysine GO:0030154; biological_process; cell differentiation GO:0033746; molecular_function; histone demethylase activity (H3-R2 specific) GO:0033749; molecular_function; histone demethylase activity (H4-R3 specific) GO:0046872; molecular_function; metal ion binding GO:0048024; biological_process; regulation of mRNA splicing, via spliceosome GO:0051213; molecular_function; dioxygenase activity GO:0055114; biological_process; oxidation-reduction process GO:0070078; biological_process; histone H3-R2 demethylation GO:0070079; biological_process; histone H4-R3 demethylation GO:0070815; molecular_function; peptidyl-lysine 5-dioxygenase activity
Type	Genomic
Sequence	HORVU.MOREX.r2.7HG0605570.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)