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GrainGenes Probe Report: HORVU.MOREX.r2.7HG0602810

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
HORVU.MOREX.r2.7HG0602810
Locus
HORVU.MOREX.r2.7HG0602810.1
URL
Gene Ontology GO:0005730
[ Show all 16 ]
Reference
ReferenceMonat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks
[ Hide all but 1 of 18 ]
Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta).
Functional annotation published with the genome: 3, 4-dihydroxy-2-butanone 4-phosphate synthase
GO:0005730; cellular_component; nucleolus
GO:0005773; cellular_component; vacuole
GO:0005774; cellular_component; vacuolar membrane
GO:0005783; cellular_component; endoplasmic reticulum
GO:0005789; cellular_component; endoplasmic reticulum membrane
GO:0005794; cellular_component; Golgi apparatus
GO:0006486; biological_process; protein glycosylation
GO:0009505; cellular_component; plant-type cell wall
GO:0009506; cellular_component; plasmodesma
GO:0009664; biological_process; plant-type cell wall organization
GO:0009826; biological_process; unidimensional cell growth
GO:0016020; cellular_component; membrane
GO:0016021; cellular_component; integral component of membrane
GO:0016740; molecular_function; transferase activity
GO:0016757; molecular_function; transferase activity, transferring glycosyl groups
GO:0018279; biological_process; protein N-linked glycosylation via asparagine
Type
Genomic
Sequence
HORVU.MOREX.r2.7HG0602810.1
Source Species
Hordeum vulgare
Source Germplasm
Morex (barley)