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GrainGenes Probe Report: HORVU.MOREX.r2.7HG0572060

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.7HG0572060
Locus	HORVU.MOREX.r2.7HG0572060.1
URL	Gene Ontology GO:0000139 [ Show all 32 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 34 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: RNA-directed DNA polymerase (Reverse transcriptase) GO:0000139; cellular_component; Golgi membrane GO:0000166; molecular_function; nucleotide binding GO:0001726; cellular_component; ruffle GO:0004672; molecular_function; protein kinase activity GO:0004674; molecular_function; protein serine/threonine kinase activity GO:0005524; molecular_function; ATP binding GO:0005737; cellular_component; cytoplasm GO:0005794; cellular_component; Golgi apparatus GO:0005814; cellular_component; centriole GO:0005856; cellular_component; cytoskeleton GO:0005886; cellular_component; plasma membrane GO:0006468; biological_process; protein phosphorylation GO:0006915; biological_process; apoptotic process GO:0007010; biological_process; cytoskeleton organization GO:0007266; biological_process; Rho protein signal transduction GO:0016020; cellular_component; membrane GO:0016301; molecular_function; kinase activity GO:0016310; biological_process; phosphorylation GO:0016740; molecular_function; transferase activity GO:0017048; molecular_function; Rho GTPase binding GO:0017049; molecular_function; GTP-Rho binding GO:0030027; cellular_component; lamellipodium GO:0030036; biological_process; actin cytoskeleton organization GO:0032059; cellular_component; bleb GO:0035556; biological_process; intracellular signal transduction GO:0042995; cellular_component; cell projection GO:0046872; molecular_function; metal ion binding GO:0051451; biological_process; myoblast migration GO:0051492; biological_process; regulation of stress fiber assembly GO:0051493; biological_process; regulation of cytoskeleton organization GO:0051894; biological_process; positive regulation of focal adhesion assembly GO:2000114; biological_process; regulation of establishment of cell polarity
Type	Genomic
Sequence	HORVU.MOREX.r2.7HG0572060.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)