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GrainGenes Probe Report: HORVU.MOREX.r2.7HG0566530

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.7HG0566530
Locus	HORVU.MOREX.r2.7HG0566530.1
URL	Gene Ontology GO:0000165 [ Show all 25 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 27 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Sec14p-like phosphatidylinositol transfer family protein GO:0000165; biological_process; MAPK cascade GO:0003779; molecular_function; actin binding GO:0005088; molecular_function; Ras guanyl-nucleotide exchange factor activity GO:0005200; molecular_function; structural constituent of cytoskeleton GO:0005543; molecular_function; phospholipid binding GO:0005615; cellular_component; extracellular space GO:0005737; cellular_component; cytoplasm GO:0005829; cellular_component; cytosol GO:0005856; cellular_component; cytoskeleton GO:0005938; cellular_component; cell cortex GO:0006888; biological_process; endoplasmic reticulum to Golgi vesicle-mediated transport GO:0007010; biological_process; cytoskeleton organization GO:0007411; biological_process; axon guidance GO:0007416; biological_process; synapse assembly GO:0008091; cellular_component; spectrin GO:0016192; biological_process; vesicle-mediated transport GO:0016324; cellular_component; apical plasma membrane GO:0019886; biological_process; antigen processing and presentation of exogenous peptide antigen via MHC class II GO:0021692; biological_process; cerebellar Purkinje cell layer morphogenesis GO:0030054; cellular_component; cell junction GO:0030534; biological_process; adult behavior GO:0035264; biological_process; multicellular organism growth GO:0043025; cellular_component; neuronal cell body GO:0045296; molecular_function; cadherin binding GO:0051693; biological_process; actin filament capping
Type	Genomic
Sequence	HORVU.MOREX.r2.7HG0566530.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)