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GrainGenes Probe Report: HORVU.MOREX.r2.7HG0565540

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.7HG0565540
Locus	HORVU.MOREX.r2.7HG0565540.1
URL	Gene Ontology GO:0000166 [ Show all 30 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 32 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta). Functional annotation published with the genome: 1, 4-alpha-glucan branching enzyme GlgB GO:0000166; molecular_function; nucleotide binding GO:0000183; biological_process; chromatin silencing at rDNA GO:0000793; cellular_component; condensed chromosome GO:0001650; cellular_component; fibrillar center GO:0003676; molecular_function; nucleic acid binding GO:0003677; molecular_function; DNA binding GO:0004386; molecular_function; helicase activity GO:0005515; molecular_function; protein binding GO:0005524; molecular_function; ATP binding GO:0005634; cellular_component; nucleus GO:0005654; cellular_component; nucleoplasm GO:0005677; cellular_component; chromatin silencing complex GO:0006325; biological_process; chromatin organization GO:0006333; biological_process; chromatin assembly or disassembly GO:0006334; biological_process; nucleosome assembly GO:0006338; biological_process; chromatin remodeling GO:0006352; biological_process; DNA-templated transcription, initiation GO:0016584; biological_process; nucleosome positioning GO:0016589; cellular_component; NURF complex GO:0016787; molecular_function; hydrolase activity GO:0016818; molecular_function; hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides GO:0016887; molecular_function; ATPase activity GO:0031010; cellular_component; ISWI-type complex GO:0031213; cellular_component; RSF complex GO:0031491; molecular_function; nucleosome binding GO:0042393; molecular_function; histone binding GO:0043044; biological_process; ATP-dependent chromatin remodeling GO:0043596; cellular_component; nuclear replication fork GO:0045893; biological_process; positive regulation of transcription, DNA-templated GO:1990830; biological_process; cellular response to leukemia inhibitory factor
Type	Genomic
Sequence	HORVU.MOREX.r2.7HG0565540.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)