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GrainGenes Probe Report: HORVU.MOREX.r2.7HG0561960

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.7HG0561960
Locus	HORVU.MOREX.r2.7HG0561960.1
URL	Gene Ontology GO:0000289 [ Show all 16 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 18 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta). Functional annotation published with the genome: Peroxidase GO:0000289; biological_process; nuclear-transcribed mRNA poly(A) tail shortening GO:0000932; cellular_component; P-body GO:0003723; molecular_function; RNA binding GO:0004518; molecular_function; nuclease activity GO:0004527; molecular_function; exonuclease activity GO:0004535; molecular_function; poly(A)-specific ribonuclease activity GO:0005634; cellular_component; nucleus GO:0005737; cellular_component; cytoplasm GO:0006351; biological_process; transcription, DNA-templated GO:0006355; biological_process; regulation of transcription, DNA-templated GO:0016787; molecular_function; hydrolase activity GO:0030014; cellular_component; CCR4-NOT complex GO:0030015; cellular_component; CCR4-NOT core complex GO:0046872; molecular_function; metal ion binding GO:0090305; biological_process; nucleic acid phosphodiester bond hydrolysis GO:0090503; biological_process; RNA phosphodiester bond hydrolysis, exonucleolytic
Type	Genomic
Sequence	HORVU.MOREX.r2.7HG0561960.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)