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GrainGenes Probe Report: HORVU.MOREX.r2.7HG0560940

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.7HG0560940
Locus	HORVU.MOREX.r2.7HG0560940.1
URL	Gene Ontology GO:0000298 [ Show all 24 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 26 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta). Functional annotation published with the genome: Jasmonate O-methyltransferase GO:0000298; molecular_function; endopolyphosphatase activity GO:0005622; cellular_component; intracellular GO:0005634; cellular_component; nucleus GO:0005737; cellular_component; cytoplasm GO:0005829; cellular_component; cytosol GO:0008486; molecular_function; diphosphoinositol-polyphosphate diphosphatase activity GO:0016787; molecular_function; hydrolase activity GO:0034431; molecular_function; bis(5'-adenosyl)-hexaphosphatase activity GO:0034432; molecular_function; bis(5'-adenosyl)-pentaphosphatase activity GO:0046872; molecular_function; metal ion binding GO:0050072; molecular_function; m7G(5')pppN diphosphatase activity GO:0052840; molecular_function; inositol diphosphate tetrakisphosphate diphosphatase activity GO:0052841; molecular_function; inositol bisdiphosphate tetrakisphosphate diphosphatase activity GO:0052842; molecular_function; inositol diphosphate pentakisphosphate diphosphatase activity GO:0052843; molecular_function; inositol-1-diphosphate-2, 3, 4, 5, 6-pentakisphosphate diphosphatase activity GO:0052844; molecular_function; inositol-3-diphosphate-1, 2, 4, 5, 6-pentakisphosphate diphosphatase activity GO:0052845; molecular_function; inositol-5-diphosphate-1, 2, 3, 4, 6-pentakisphosphate diphosphatase activity GO:0052846; molecular_function; inositol-1, 5-bisdiphosphate-2, 3, 4, 6-tetrakisphosphate 1-diphosphatase activity GO:0052847; molecular_function; inositol-1, 5-bisdiphosphate-2, 3, 4, 6-tetrakisphosphate 5-diphosphatase activity GO:0052848; molecular_function; inositol-3, 5-bisdiphosphate-2, 3, 4, 6-tetrakisphosphate 5-diphosphatase activity GO:0071543; biological_process; diphosphoinositol polyphosphate metabolic process GO:1901907; biological_process; diadenosine pentaphosphate catabolic process GO:1901909; biological_process; diadenosine hexaphosphate catabolic process GO:1901911; biological_process; adenosine 5'-(hexahydrogen pentaphosphate) catabolic process
Type	Genomic
Sequence	HORVU.MOREX.r2.7HG0560940.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)