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GrainGenes Probe Report: HORVU.MOREX.r2.7HG0560900

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.7HG0560900
Locus	HORVU.MOREX.r2.7HG0560900.1
URL	Gene Ontology GO:0015238 [ Show all 19 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 22 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Diphosphoinositol polyphosphate phosphohydrolase 3-beta GO:0042910; molecular_function; xenobiotic transmembrane transporter activity The GO term GO:0015238 was intially assigned to this transcript and is now obsolete. It has been replaced by: GO:0042910 GO:0005096; molecular_function; GTPase activator activity GO:0005515; molecular_function; protein binding GO:0005829; cellular_component; cytosol GO:0006855; biological_process; drug transmembrane transport GO:0006897; biological_process; endocytosis GO:0006935; biological_process; chemotaxis GO:0007165; biological_process; signal transduction GO:0007264; biological_process; small GTPase mediated signal transduction GO:0016020; cellular_component; membrane GO:0017160; molecular_function; Ral GTPase binding GO:0022857; molecular_function; transmembrane transporter activity GO:0042626; molecular_function; ATPase-coupled transmembrane transporter activity GO:0043087; biological_process; regulation of GTPase activity GO:0043547; biological_process; positive regulation of GTPase activity GO:0048365; molecular_function; Rac GTPase binding GO:0051056; biological_process; regulation of small GTPase mediated signal transduction GO:0055085; biological_process; transmembrane transport GO:1900753; biological_process; doxorubicin transport
Type	Genomic
Sequence	HORVU.MOREX.r2.7HG0560900.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)