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GrainGenes Probe Report: HORVU.MOREX.r2.7HG0560460

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.7HG0560460
Locus	HORVU.MOREX.r2.7HG0560460.1
URL	Gene Ontology GO:0009409 [ Show all 23 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 25 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: UPF0061 protein GO:0009409; biological_process; response to cold GO:0009507; cellular_component; chloroplast GO:0009522; cellular_component; photosystem I GO:0009523; cellular_component; photosystem II GO:0009534; cellular_component; chloroplast thylakoid GO:0009535; cellular_component; chloroplast thylakoid membrane GO:0009536; cellular_component; plastid GO:0009579; cellular_component; thylakoid GO:0009637; biological_process; response to blue light GO:0009644; biological_process; response to high light intensity GO:0009645; biological_process; response to low light intensity stimulus GO:0009765; biological_process; photosynthesis, light harvesting GO:0009768; biological_process; photosynthesis, light harvesting in photosystem I GO:0009941; cellular_component; chloroplast envelope GO:0010114; biological_process; response to red light GO:0010218; biological_process; response to far red light GO:0010287; cellular_component; plastoglobule GO:0015979; biological_process; photosynthesis GO:0016020; cellular_component; membrane GO:0016021; cellular_component; integral component of membrane GO:0016168; molecular_function; chlorophyll binding GO:0018298; biological_process; protein-chromophore linkage GO:0019904; molecular_function; protein domain specific binding
Type	Genomic
Sequence	HORVU.MOREX.r2.7HG0560460.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)