GrainGenes Probe Report: HORVU.MOREX.r2.7HG0550810
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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.
Probe
HORVU.MOREX.r2.7HG0550810
Locus
HORVU.MOREX.r2.7HG0550810.1
URL
Gene Ontology GO:0000151
[ Show all 11 ]
Reference
Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks
[ Hide all but 1 of 13 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Scarecrow transcription factor family protein GO:0000151; cellular_component; ubiquitin ligase complex GO:0000209; biological_process; protein polyubiquitination GO:0003676; molecular_function; nucleic acid binding GO:0004842; molecular_function; ubiquitin-protein transferase activity GO:0005737; cellular_component; cytoplasm GO:0016567; biological_process; protein ubiquitination GO:0016740; molecular_function; transferase activity GO:0031624; molecular_function; ubiquitin conjugating enzyme binding GO:0032436; biological_process; positive regulation of proteasomal ubiquitin-dependent protein catabolic process GO:0046872; molecular_function; metal ion binding GO:0061630; molecular_function; ubiquitin protein ligase activity
Type
Genomic
Sequence
HORVU.MOREX.r2.7HG0550810.1
Source Species
Hordeum vulgare
Source Germplasm
Morex (barley)
GrainGenes Probe Report: HORVU.MOREX.r2.7HG0550810
[Submit comment/correction][What is a probe?]
Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.
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