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GrainGenes Probe Report: HORVU.MOREX.r2.7HG0550260

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.7HG0550260
Locus	HORVU.MOREX.r2.7HG0550260.1
URL	Gene Ontology GO:0004888 [ Show all 27 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 29 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta). Functional annotation published with the genome: Transcription elongation factor SPT5 GO:0004888; molecular_function; transmembrane signaling receptor activity GO:0005216; molecular_function; ion channel activity GO:0005230; molecular_function; extracellular ligand-gated ion channel activity GO:0005254; molecular_function; chloride channel activity GO:0005886; cellular_component; plasma membrane GO:0005887; cellular_component; integral component of plasma membrane GO:0006811; biological_process; ion transport GO:0006821; biological_process; chloride transport GO:0007218; biological_process; neuropeptide signaling pathway GO:0007416; biological_process; synapse assembly GO:0016020; cellular_component; membrane GO:0016021; cellular_component; integral component of membrane GO:0016594; molecular_function; glycine binding GO:0016934; molecular_function; extracellularly glycine-gated chloride channel activity GO:0021510; biological_process; spinal cord development GO:0022824; molecular_function; transmitter-gated ion channel activity GO:0030054; cellular_component; cell junction GO:0034220; biological_process; ion transmembrane transport GO:0034707; cellular_component; chloride channel complex GO:0042995; cellular_component; cell projection GO:0043200; biological_process; response to amino acid GO:0045202; cellular_component; synapse GO:0045211; cellular_component; postsynaptic membrane GO:0046872; molecular_function; metal ion binding GO:0060012; biological_process; synaptic transmission, glycinergic GO:0060079; biological_process; excitatory postsynaptic potential GO:1902476; biological_process; chloride transmembrane transport
Type	Genomic
Sequence	HORVU.MOREX.r2.7HG0550260.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)