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GrainGenes Probe Report: HORVU.MOREX.r2.7HG0538950

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.7HG0538950
Locus	HORVU.MOREX.r2.7HG0538950.1
URL	Gene Ontology GO:0001666 [ Show all 39 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 41 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: protein kinase family protein GO:0001666; biological_process; response to hypoxia GO:0005216; molecular_function; ion channel activity GO:0005244; molecular_function; voltage-gated ion channel activity GO:0005249; molecular_function; voltage-gated potassium channel activity GO:0005267; molecular_function; potassium channel activity GO:0005515; molecular_function; protein binding GO:0005783; cellular_component; endoplasmic reticulum GO:0005789; cellular_component; endoplasmic reticulum membrane GO:0005886; cellular_component; plasma membrane GO:0006811; biological_process; ion transport GO:0006813; biological_process; potassium ion transport GO:0007568; biological_process; aging GO:0008076; cellular_component; voltage-gated potassium channel complex GO:0009268; biological_process; response to pH GO:0009897; cellular_component; external side of plasma membrane GO:0015269; molecular_function; calcium-activated potassium channel activity GO:0016020; cellular_component; membrane GO:0016021; cellular_component; integral component of membrane GO:0016324; cellular_component; apical plasma membrane GO:0030425; cellular_component; dendrite GO:0031960; biological_process; response to corticosteroid GO:0032991; cellular_component; protein-containing complex GO:0034765; biological_process; regulation of ion transmembrane transport GO:0042803; molecular_function; protein homodimerization activity GO:0043025; cellular_component; neuronal cell body GO:0043525; biological_process; positive regulation of neuron apoptotic process GO:0043627; biological_process; response to estrogen GO:0044877; molecular_function; protein-containing complex binding GO:0046872; molecular_function; metal ion binding GO:0048471; cellular_component; perinuclear region of cytoplasm GO:0048787; cellular_component; presynaptic active zone membrane GO:0051289; biological_process; protein homotetramerization GO:0051592; biological_process; response to calcium ion GO:0055085; biological_process; transmembrane transport GO:0060072; molecular_function; large conductance calcium-activated potassium channel activity GO:0071805; biological_process; potassium ion transmembrane transport GO:0097746; biological_process; regulation of blood vessel diameter GO:0097755; biological_process; positive regulation of blood vessel diameter GO:1904348; biological_process; negative regulation of small intestine smooth muscle contraction
Type	Genomic
Sequence	HORVU.MOREX.r2.7HG0538950.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)