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GrainGenes Probe Report: HORVU.MOREX.r2.7HG0533600

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.7HG0533600
Locus	HORVU.MOREX.r2.7HG0533600.1
URL	Gene Ontology GO:0001764 [ Show all 20 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 22 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: RING/U-box superfamily protein GO:0001764; biological_process; neuron migration GO:0003677; molecular_function; DNA binding GO:0003729; molecular_function; mRNA binding GO:0005634; cellular_component; nucleus GO:0006351; biological_process; transcription, DNA-templated GO:0006355; biological_process; regulation of transcription, DNA-templated GO:0006357; biological_process; regulation of transcription by RNA polymerase II GO:0006368; biological_process; transcription elongation from RNA polymerase II promoter GO:0006397; biological_process; mRNA processing GO:0021954; biological_process; central nervous system neuron development GO:0030097; biological_process; hemopoiesis GO:0032044; cellular_component; DSIF complex GO:0032784; biological_process; regulation of DNA-templated transcription, elongation GO:0032968; biological_process; positive regulation of transcription elongation from RNA polymerase II promoter GO:0034244; biological_process; negative regulation of transcription elongation from RNA polymerase II promoter GO:0040037; biological_process; negative regulation of fibroblast growth factor receptor signaling pathway GO:0046427; biological_process; positive regulation of receptor signaling pathway via JAK-STAT GO:0060335; biological_process; positive regulation of interferon-gamma-mediated signaling pathway GO:1901534; biological_process; positive regulation of hematopoietic progenitor cell differentiation GO:1902038; biological_process; positive regulation of hematopoietic stem cell differentiation
Type	Genomic
Sequence	HORVU.MOREX.r2.7HG0533600.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)