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GrainGenes Probe Report: HORVU.MOREX.r2.7HG0533570

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.7HG0533570
Locus	HORVU.MOREX.r2.7HG0533570.1
URL	Gene Ontology GO:0000166 [ Show all 39 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 41 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Translation initiation factor IF-2 GO:0000166; molecular_function; nucleotide binding GO:0000266; biological_process; mitochondrial fission GO:0001917; cellular_component; photoreceptor inner segment GO:0003374; biological_process; dynamin family protein polymerization involved in mitochondrial fission GO:0003924; molecular_function; GTPase activity GO:0005515; molecular_function; protein binding GO:0005525; molecular_function; GTP binding GO:0005737; cellular_component; cytoplasm GO:0005794; cellular_component; Golgi apparatus GO:0005856; cellular_component; cytoskeleton GO:0005874; cellular_component; microtubule GO:0006897; biological_process; endocytosis GO:0007416; biological_process; synapse assembly GO:0008017; molecular_function; microtubule binding GO:0014069; cellular_component; postsynaptic density GO:0016185; biological_process; synaptic vesicle budding from presynaptic endocytic zone membrane GO:0016787; molecular_function; hydrolase activity GO:0030424; cellular_component; axon GO:0031798; molecular_function; type 1 metabotropic glutamate receptor binding GO:0031802; molecular_function; type 5 metabotropic glutamate receptor binding GO:0031966; cellular_component; mitochondrial membrane GO:0042802; molecular_function; identical protein binding GO:0043083; cellular_component; synaptic cleft GO:0043197; cellular_component; dendritic spine GO:0044327; cellular_component; dendritic spine head GO:0045202; cellular_component; synapse GO:0046847; biological_process; filopodium assembly GO:0048471; cellular_component; perinuclear region of cytoplasm GO:0050998; molecular_function; nitric-oxide synthase binding GO:0051491; biological_process; positive regulation of filopodium assembly GO:0061001; biological_process; regulation of dendritic spine morphogenesis GO:0061002; biological_process; negative regulation of dendritic spine morphogenesis GO:0061025; biological_process; membrane fusion GO:0061828; cellular_component; apical tubulobulbar complex GO:0061829; cellular_component; basal tubulobulbar complex GO:0070062; cellular_component; extracellular exosome GO:0098844; cellular_component; postsynaptic endocytic zone membrane GO:0098884; biological_process; postsynaptic neurotransmitter receptor internalization GO:1903423; biological_process; positive regulation of synaptic vesicle recycling
Type	Genomic
Sequence	HORVU.MOREX.r2.7HG0533570.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)