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GrainGenes Probe Report: HORVU.MOREX.r2.7HG0531250

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
HORVU.MOREX.r2.7HG0531250
Locus
HORVU.MOREX.r2.7HG0531250.1
URL
Gene Ontology GO:0005215
[ Show all 9 ]
Reference
ReferenceMonat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks
[ Hide all but 1 of 11 ]
Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database).
Functional annotation published with the genome: F-box protein
GO:0005215; molecular_function; transporter activity
GO:0005773; cellular_component; vacuole
GO:0005774; cellular_component; vacuolar membrane
GO:0006865; biological_process; amino acid transport
GO:0006914; biological_process; autophagy
GO:0016020; cellular_component; membrane
GO:0016021; cellular_component; integral component of membrane
GO:0032974; biological_process; amino acid transmembrane export from vacuole
GO:0071627; cellular_component; integral component of fungal-type vacuolar membrane
Type
Genomic
Sequence
HORVU.MOREX.r2.7HG0531250.1
Source Species
Hordeum vulgare
Source Germplasm
Morex (barley)