Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Probe Report: HORVU.MOREX.r2.6HG0525340

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.6HG0525340
Locus	HORVU.MOREX.r2.6HG0525340.1
URL	Gene Ontology GO:0001659 [ Show all 25 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 27 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: 30S ribosomal protein S12 GO:0001659; biological_process; temperature homeostasis GO:0001996; biological_process; positive regulation of heart rate by epinephrine-norepinephrine GO:0002025; biological_process; norepinephrine-epinephrine-mediated vasodilation involved in regulation of systemic arterial blood pressure GO:0004871; molecular_function; obsolete signal transducer activity GO:0004930; molecular_function; G protein-coupled receptor activity GO:0004935; molecular_function; adrenergic receptor activity GO:0004940; molecular_function; beta1-adrenergic receptor activity GO:0005088; molecular_function; Ras guanyl-nucleotide exchange factor activity GO:0005768; cellular_component; endosome GO:0005769; cellular_component; early endosome GO:0005886; cellular_component; plasma membrane GO:0005887; cellular_component; integral component of plasma membrane GO:0007165; biological_process; signal transduction GO:0007186; biological_process; G protein-coupled receptor signaling pathway GO:0007189; biological_process; adenylate cyclase-activating G protein-coupled receptor signaling pathway GO:0007267; biological_process; cell-cell signaling GO:0016020; cellular_component; membrane GO:0016021; cellular_component; integral component of membrane GO:0030819; biological_process; obsolete positive regulation of cAMP biosynthetic process GO:0043547; biological_process; positive regulation of GTPase activity GO:0043950; biological_process; positive regulation of cAMP-mediated signaling GO:0045823; biological_process; positive regulation of heart contraction GO:0051379; molecular_function; epinephrine binding GO:0051380; molecular_function; norepinephrine binding GO:0071880; biological_process; adenylate cyclase-activating adrenergic receptor signaling pathway
Type	Genomic
Sequence	HORVU.MOREX.r2.6HG0525340.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)