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GrainGenes Probe Report: HORVU.MOREX.r2.6HG0524810

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
HORVU.MOREX.r2.6HG0524810
Locus
HORVU.MOREX.r2.6HG0524810.1
URL
Gene Ontology GO:0005080
[ Show all 15 ]
Reference
ReferenceMonat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks
[ Hide all but 1 of 17 ]
Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database).
Functional annotation published with the genome: Serine/threonine protein phosphatase 7 long form isogeny
GO:0005080; molecular_function; protein kinase C binding
GO:0005509; molecular_function; calcium ion binding
GO:0005576; cellular_component; extracellular region
GO:0005615; cellular_component; extracellular space
GO:0005737; cellular_component; cytoplasm
GO:0008201; molecular_function; heparin binding
GO:0016020; cellular_component; membrane
GO:0030425; cellular_component; dendrite
GO:0040008; biological_process; regulation of growth
GO:0042802; molecular_function; identical protein binding
GO:0043204; cellular_component; perikaryon
GO:0046543; biological_process; development of secondary female sexual characteristics
GO:0046887; biological_process; positive regulation of hormone secretion
GO:0070050; biological_process; neuron cellular homeostasis
GO:0070207; biological_process; protein homotrimerization
Type
Genomic
Sequence
HORVU.MOREX.r2.6HG0524810.1
Source Species
Hordeum vulgare
Source Germplasm
Morex (barley)