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GrainGenes Probe Report: HORVU.MOREX.r2.6HG0524030

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.6HG0524030
Locus	HORVU.MOREX.r2.6HG0524030.1
URL	Gene Ontology GO:0000123 [ Show all 60 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 62 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Na(+)/H(+) antiporter NhaB GO:0000123; cellular_component; histone acetyltransferase complex GO:0000791; cellular_component; euchromatin GO:0001933; biological_process; negative regulation of protein phosphorylation GO:0001934; biological_process; positive regulation of protein phosphorylation GO:0005515; molecular_function; protein binding GO:0005547; molecular_function; phosphatidylinositol-3, 4, 5-trisphosphate binding GO:0005634; cellular_component; nucleus GO:0005737; cellular_component; cytoplasm GO:0005739; cellular_component; mitochondrion GO:0005829; cellular_component; cytosol GO:0005886; cellular_component; plasma membrane GO:0006041; biological_process; glucosamine metabolic process GO:0006110; biological_process; regulation of glycolytic process GO:0006111; biological_process; regulation of gluconeogenesis GO:0006325; biological_process; chromatin organization GO:0006486; biological_process; protein glycosylation GO:0006493; biological_process; protein O-linked glycosylation GO:0006915; biological_process; apoptotic process GO:0008134; molecular_function; transcription factor binding GO:0008289; molecular_function; lipid binding GO:0010628; biological_process; positive regulation of gene expression GO:0010801; biological_process; negative regulation of peptidyl-threonine phosphorylation GO:0016020; cellular_component; membrane GO:0016262; molecular_function; protein N-acetylglucosaminyltransferase activity GO:0016485; biological_process; protein processing GO:0016740; molecular_function; transferase activity GO:0016757; molecular_function; transferase activity, transferring glycosyl groups GO:0019904; molecular_function; protein domain specific binding GO:0030900; biological_process; forebrain development GO:0031397; biological_process; negative regulation of protein ubiquitination GO:0032869; biological_process; cellular response to insulin stimulus GO:0032922; biological_process; circadian regulation of gene expression GO:0033137; biological_process; negative regulation of peptidyl-serine phosphorylation GO:0042277; molecular_function; peptide binding GO:0042588; cellular_component; zymogen granule GO:0043005; cellular_component; neuron projection GO:0043025; cellular_component; neuronal cell body GO:0043981; biological_process; histone H4-K5 acetylation GO:0043982; biological_process; histone H4-K8 acetylation GO:0043984; biological_process; histone H4-K16 acetylation GO:0045793; biological_process; positive regulation of cell size GO:0045862; biological_process; positive regulation of proteolysis GO:0045944; biological_process; positive regulation of transcription by RNA polymerase II GO:0048015; biological_process; phosphatidylinositol-mediated signaling GO:0048029; molecular_function; monosaccharide binding GO:0048312; biological_process; intracellular distribution of mitochondria GO:0048511; biological_process; rhythmic process GO:0060548; biological_process; negative regulation of cell death GO:0061087; biological_process; positive regulation of histone H3-K27 methylation GO:0070207; biological_process; protein homotrimerization GO:0070208; biological_process; protein heterotrimerization GO:0071222; biological_process; cellular response to lipopolysaccharide GO:0071333; biological_process; cellular response to glucose stimulus GO:0080182; biological_process; histone H3-K4 trimethylation GO:0090315; biological_process; negative regulation of protein targeting to membrane GO:0097237; biological_process; cellular response to toxic substance GO:0097363; molecular_function; protein O-GlcNAc transferase activity GO:1900038; biological_process; negative regulation of cellular response to hypoxia GO:1900182; biological_process; positive regulation of protein localization to nucleus GO:1903428; biological_process; positive regulation of reactive oxygen species biosynthetic process
Type	Genomic
Sequence	HORVU.MOREX.r2.6HG0524030.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)