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GrainGenes Probe Report: HORVU.MOREX.r2.6HG0513150

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.6HG0513150
Locus	HORVU.MOREX.r2.6HG0513150.1
URL	Gene Ontology GO:0004842 [ Show all 14 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 16 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: UPF0182 protein NFA_45260 GO:0004842; molecular_function; ubiquitin-protein transferase activity GO:0005634; cellular_component; nucleus GO:0006281; biological_process; DNA repair GO:0009640; biological_process; photomorphogenesis GO:0009641; biological_process; shade avoidance GO:0009649; biological_process; entrainment of circadian clock GO:0010119; biological_process; regulation of stomatal movement GO:0016567; biological_process; protein ubiquitination GO:0016604; cellular_component; nuclear body GO:0016874; molecular_function; ligase activity GO:0042802; molecular_function; identical protein binding GO:0046283; biological_process; anthocyanin-containing compound metabolic process GO:0048573; biological_process; photoperiodism, flowering GO:0061630; molecular_function; ubiquitin protein ligase activity
Type	Genomic
Sequence	HORVU.MOREX.r2.6HG0513150.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)