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GrainGenes Probe Report: HORVU.MOREX.r2.6HG0509640

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.6HG0509640
Locus	HORVU.MOREX.r2.6HG0509640.1
URL	Gene Ontology GO:0000049 [ Show all 14 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 16 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Alpha-galactosidase GO:0000049; molecular_function; tRNA binding GO:0002098; biological_process; tRNA wobble uridine modification GO:0005634; cellular_component; nucleus GO:0005737; cellular_component; cytoplasm GO:0008152; biological_process; metabolic process GO:0008168; molecular_function; methyltransferase activity GO:0008175; molecular_function; tRNA methyltransferase activity GO:0008198; molecular_function; ferrous iron binding GO:0016300; molecular_function; tRNA (uracil) methyltransferase activity GO:0016706; molecular_function; 2-oxoglutarate-dependent dioxygenase activity GO:0016740; molecular_function; transferase activity GO:0030488; biological_process; tRNA methylation GO:0032259; biological_process; methylation GO:0055114; biological_process; oxidation-reduction process
Type	Genomic
Sequence	HORVU.MOREX.r2.6HG0509640.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)