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GrainGenes Probe Report: HORVU.MOREX.r2.6HG0506640

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.6HG0506640
Locus	HORVU.MOREX.r2.6HG0506640.1
URL	Gene Ontology GO:0000166 [ Show all 40 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 42 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: DNA-directed RNA polymerase II subunit rpb4 GO:0000166; molecular_function; nucleotide binding GO:0001678; biological_process; cellular glucose homeostasis GO:0005267; molecular_function; potassium channel activity GO:0005524; molecular_function; ATP binding GO:0005886; cellular_component; plasma membrane GO:0006813; biological_process; potassium ion transport GO:0007165; biological_process; signal transduction GO:0007565; biological_process; female pregnancy GO:0007613; biological_process; memory GO:0008076; cellular_component; voltage-gated potassium channel complex GO:0008281; molecular_function; sulfonylurea receptor activity GO:0008282; cellular_component; inward rectifying potassium channel GO:0008542; biological_process; visual learning GO:0009268; biological_process; response to pH GO:0010043; biological_process; response to zinc ion GO:0010989; biological_process; negative regulation of low-density lipoprotein particle clearance GO:0016020; cellular_component; membrane GO:0016021; cellular_component; integral component of membrane GO:0016525; biological_process; negative regulation of angiogenesis GO:0016887; molecular_function; ATPase activity GO:0030672; cellular_component; synaptic vesicle membrane GO:0032496; biological_process; response to lipopolysaccharide GO:0032760; biological_process; positive regulation of tumor necrosis factor production GO:0032868; biological_process; response to insulin GO:0042383; cellular_component; sarcolemma GO:0042493; biological_process; response to drug GO:0042626; molecular_function; ATPase-coupled transmembrane transporter activity GO:0043268; biological_process; positive regulation of potassium ion transport GO:0046676; biological_process; negative regulation of insulin secretion GO:0050768; biological_process; negative regulation of neurogenesis GO:0055085; biological_process; transmembrane transport GO:0060253; biological_process; negative regulation of glial cell proliferation GO:0061045; biological_process; negative regulation of wound healing GO:0061855; biological_process; negative regulation of neuroblast migration GO:0071310; biological_process; cellular response to organic substance GO:0071805; biological_process; potassium ion transmembrane transport GO:1900721; biological_process; positive regulation of uterine smooth muscle relaxation GO:1903818; biological_process; positive regulation of voltage-gated potassium channel activity GO:1905075; biological_process; positive regulation of tight junction disassembly GO:1905604; biological_process; negative regulation of maintenance of permeability of blood-brain barrier
Type	Genomic
Sequence	HORVU.MOREX.r2.6HG0506640.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)