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GrainGenes Probe Report: HORVU.MOREX.r2.6HG0501020

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.6HG0501020
Locus	HORVU.MOREX.r2.6HG0501020.1
URL	Gene Ontology GO:0000977 [ Show all 24 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 26 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta). Functional annotation published with the genome: RING finger protein GO:0000977; molecular_function; RNA polymerase II regulatory region sequence-specific DNA binding GO:0003677; molecular_function; DNA binding GO:0003700; molecular_function; DNA-binding transcription factor activity GO:0005634; cellular_component; nucleus GO:0006351; biological_process; transcription, DNA-templated GO:0006355; biological_process; regulation of transcription, DNA-templated GO:0009553; biological_process; embryo sac development GO:0010022; biological_process; meristem determinacy GO:0010093; biological_process; specification of floral organ identity GO:0010094; biological_process; specification of carpel identity GO:0010582; biological_process; floral meristem determinacy GO:0045893; biological_process; positive regulation of transcription, DNA-templated GO:0045944; biological_process; positive regulation of transcription by RNA polymerase II GO:0046983; molecular_function; protein dimerization activity GO:0048316; biological_process; seed development GO:0048437; biological_process; floral organ development GO:0048449; biological_process; floral organ formation GO:0048455; biological_process; stamen formation GO:0048457; biological_process; floral whorl morphogenesis GO:0048459; biological_process; floral whorl structural organization GO:0048509; biological_process; regulation of meristem development GO:0048833; biological_process; specification of floral organ number GO:0080060; biological_process; integument development GO:0080112; biological_process; seed growth
Type	Genomic
Sequence	HORVU.MOREX.r2.6HG0501020.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)