Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Probe Report: HORVU.MOREX.r2.6HG0495410

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.6HG0495410
Locus	HORVU.MOREX.r2.6HG0495410.1
URL	Gene Ontology GO:0000166 [ Show all 17 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 19 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta). Functional annotation published with the genome: Beta-1, 3-galactosyltransferase-like protein GO:0000166; molecular_function; nucleotide binding GO:0004733; molecular_function; pyridoxamine-phosphate oxidase activity GO:0005739; cellular_component; mitochondrion GO:0005829; cellular_component; cytosol GO:0006734; biological_process; NADH metabolic process GO:0006739; biological_process; NADP metabolic process GO:0008615; biological_process; pyridoxine biosynthetic process GO:0009507; cellular_component; chloroplast GO:0010181; molecular_function; FMN binding GO:0016638; molecular_function; oxidoreductase activity, acting on the CH-NH2 group of donors GO:0016853; molecular_function; isomerase activity GO:0042823; biological_process; pyridoxal phosphate biosynthetic process GO:0046872; molecular_function; metal ion binding GO:0048037; molecular_function; cofactor binding GO:0052856; molecular_function; NADHX epimerase activity GO:0052857; molecular_function; NADPHX epimerase activity GO:0055114; biological_process; oxidation-reduction process
Type	Genomic
Sequence	HORVU.MOREX.r2.6HG0495410.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)