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GrainGenes Probe Report: HORVU.MOREX.r2.6HG0489850

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.6HG0489850
Locus	HORVU.MOREX.r2.6HG0489850.1
URL	Gene Ontology GO:0000045 [ Show all 47 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 49 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Protein flx-like 1 GO:0000045; biological_process; autophagosome assembly GO:0000166; molecular_function; nucleotide binding GO:0000407; cellular_component; phagophore assembly site GO:0004672; molecular_function; protein kinase activity GO:0005515; molecular_function; protein binding GO:0005524; molecular_function; ATP binding GO:0005768; cellular_component; endosome GO:0005770; cellular_component; late endosome GO:0005776; cellular_component; autophagosome GO:0005777; cellular_component; peroxisome GO:0005829; cellular_component; cytosol GO:0005930; cellular_component; axoneme GO:0006468; biological_process; protein phosphorylation GO:0006497; biological_process; protein lipidation GO:0006897; biological_process; endocytosis GO:0006914; biological_process; autophagy GO:0007032; biological_process; endosome organization GO:0007049; biological_process; cell cycle GO:0009267; biological_process; cellular response to starvation GO:0016020; cellular_component; membrane GO:0016236; biological_process; macroautophagy GO:0016301; molecular_function; kinase activity GO:0016303; molecular_function; 1-phosphatidylinositol-3-kinase activity GO:0016310; biological_process; phosphorylation GO:0016485; biological_process; protein processing GO:0016740; molecular_function; transferase activity GO:0030242; biological_process; autophagy of peroxisome GO:0030496; cellular_component; midbody GO:0030670; cellular_component; phagocytic vesicle membrane GO:0031410; cellular_component; cytoplasmic vesicle GO:0032465; biological_process; regulation of cytokinesis GO:0034162; biological_process; toll-like receptor 9 signaling pathway GO:0034271; cellular_component; phosphatidylinositol 3-kinase complex, class III, type I GO:0034272; cellular_component; phosphatidylinositol 3-kinase complex, class III, type II GO:0034497; biological_process; protein localization to phagophore assembly site GO:0035004; molecular_function; phosphatidylinositol 3-kinase activity GO:0035032; cellular_component; phosphatidylinositol 3-kinase complex, class III GO:0036092; biological_process; phosphatidylinositol-3-phosphate biosynthetic process GO:0042149; biological_process; cellular response to glucose starvation GO:0043201; biological_process; response to leucine GO:0044754; cellular_component; autolysosome GO:0045022; biological_process; early endosome to late endosome transport GO:0045335; cellular_component; phagocytic vesicle GO:0046854; biological_process; phosphatidylinositol phosphorylation GO:0048015; biological_process; phosphatidylinositol-mediated signaling GO:0050708; biological_process; regulation of protein secretion GO:0051301; biological_process; cell division
Type	Genomic
Sequence	HORVU.MOREX.r2.6HG0489850.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)