GrainGenes Probe Report: HORVU.MOREX.r2.6HG0489620
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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.
Probe
HORVU.MOREX.r2.6HG0489620
Locus
HORVU.MOREX.r2.6HG0489620.1
URL
Gene Ontology GO:0000462
[ Show all 12 ]
Reference
Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks
[ Hide all but 1 of 14 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Immunoglobulin superfamily containing leucine-rich repeat protein GO:0000462; biological_process; maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) GO:0005515; molecular_function; protein binding GO:0005634; cellular_component; nucleus GO:0005654; cellular_component; nucleoplasm GO:0005730; cellular_component; nucleolus GO:0006364; biological_process; rRNA processing GO:0019843; molecular_function; rRNA binding GO:0031167; biological_process; rRNA methylation GO:0032040; cellular_component; small-subunit processome GO:0034511; molecular_function; U3 snoRNA binding GO:0042254; biological_process; ribosome biogenesis GO:0042274; biological_process; ribosomal small subunit biogenesis
Type
Genomic
Sequence
HORVU.MOREX.r2.6HG0489620.1
Source Species
Hordeum vulgare
Source Germplasm
Morex (barley)
GrainGenes Probe Report: HORVU.MOREX.r2.6HG0489620
[Submit comment/correction][What is a probe?]
Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.
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