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GrainGenes Probe Report: HORVU.MOREX.r2.6HG0475640

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
HORVU.MOREX.r2.6HG0475640
Locus
HORVU.MOREX.r2.6HG0475640.1
URL
Gene Ontology GO:0000166
[ Show all 13 ]
Reference
ReferenceMonat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks
[ Hide all but 1 of 15 ]
Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database).
Functional annotation published with the genome: 60S ribosomal protein L27
GO:0000166; molecular_function; nucleotide binding
GO:0004756; molecular_function; selenide, water dikinase activity
GO:0005524; molecular_function; ATP binding
GO:0005634; cellular_component; nucleus
GO:0005886; cellular_component; plasma membrane
GO:0016020; cellular_component; membrane
GO:0016260; biological_process; selenocysteine biosynthetic process
GO:0016301; molecular_function; kinase activity
GO:0016310; biological_process; phosphorylation
GO:0016740; molecular_function; transferase activity
GO:0031965; cellular_component; nuclear membrane
GO:0042803; molecular_function; protein homodimerization activity
GO:0046982; molecular_function; protein heterodimerization activity
Type
Genomic
Sequence
HORVU.MOREX.r2.6HG0475640.1
Source Species
Hordeum vulgare
Source Germplasm
Morex (barley)