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GrainGenes Probe Report: HORVU.MOREX.r2.6HG0475000

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.6HG0475000
Locus	HORVU.MOREX.r2.6HG0475000.1
URL	Gene Ontology GO:0001525 [ Show all 21 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 23 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta). Functional annotation published with the genome: Chlorophyll a-b binding protein, chloroplastic GO:0001525; biological_process; angiogenesis GO:0003674; molecular_function; molecular_function GO:0004659; molecular_function; prenyltransferase activity GO:0005515; molecular_function; protein binding GO:0005783; cellular_component; endoplasmic reticulum GO:0005789; cellular_component; endoplasmic reticulum membrane GO:0006486; biological_process; protein glycosylation GO:0007275; biological_process; multicellular organism development GO:0016020; cellular_component; membrane GO:0016021; cellular_component; integral component of membrane GO:0016740; molecular_function; transferase activity GO:0016765; molecular_function; transferase activity, transferring alkyl or aryl (other than methyl) groups GO:0019408; biological_process; dolichol biosynthetic process GO:0030154; biological_process; cell differentiation GO:0032383; biological_process; regulation of intracellular cholesterol transport GO:0035268; biological_process; protein mannosylation GO:0038084; biological_process; vascular endothelial growth factor signaling pathway GO:0042632; biological_process; cholesterol homeostasis GO:0043536; biological_process; positive regulation of blood vessel endothelial cell migration GO:0051000; biological_process; positive regulation of nitric-oxide synthase activity GO:0055092; biological_process; sterol homeostasis
Type	Genomic
Sequence	HORVU.MOREX.r2.6HG0475000.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)