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GrainGenes Probe Report: HORVU.MOREX.r2.6HG0474220

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.6HG0474220
Locus	HORVU.MOREX.r2.6HG0474220.1
URL	Gene Ontology GO:0003676 [ Show all 16 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 18 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta). Functional annotation published with the genome: transmembrane protein, putative (DUF247) GO:0003676; molecular_function; nucleic acid binding GO:0004190; molecular_function; aspartic-type endopeptidase activity GO:0005198; molecular_function; structural molecule activity GO:0006508; biological_process; proteolysis GO:0008233; molecular_function; peptidase activity GO:0008270; molecular_function; zinc ion binding GO:0016032; biological_process; viral process GO:0016787; molecular_function; hydrolase activity GO:0019012; cellular_component; virion GO:0019028; cellular_component; viral capsid GO:0039660; molecular_function; structural constituent of virion GO:0042025; cellular_component; host cell nucleus GO:0044095; cellular_component; host cell nucleoplasm GO:0044196; cellular_component; host cell nucleolus GO:0046797; biological_process; viral procapsid maturation GO:0046872; molecular_function; metal ion binding
Type	Genomic
Sequence	HORVU.MOREX.r2.6HG0474220.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)