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GrainGenes Probe Report: HORVU.MOREX.r2.6HG0473990

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.6HG0473990
Locus	HORVU.MOREX.r2.6HG0473990.1
URL	Gene Ontology GO:0000977 [ Show all 16 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 18 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta). Functional annotation published with the genome: DNA (Cytosine-5-)-methyltransferase GO:0000977; molecular_function; RNA polymerase II regulatory region sequence-specific DNA binding GO:0003677; molecular_function; DNA binding GO:0003700; molecular_function; DNA-binding transcription factor activity GO:0005634; cellular_component; nucleus GO:0006351; biological_process; transcription, DNA-templated GO:0006355; biological_process; regulation of transcription, DNA-templated GO:0008360; biological_process; regulation of cell shape GO:0045595; biological_process; regulation of cell differentiation GO:0045944; biological_process; positive regulation of transcription by RNA polymerase II GO:0046983; molecular_function; protein dimerization activity GO:0048316; biological_process; seed development GO:0048481; biological_process; plant ovule development GO:0051302; biological_process; regulation of cell division GO:0080060; biological_process; integument development GO:0080155; biological_process; regulation of double fertilization forming a zygote and endosperm GO:2000029; biological_process; regulation of proanthocyanidin biosynthetic process
Type	Genomic
Sequence	HORVU.MOREX.r2.6HG0473990.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)