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GrainGenes Probe Report: HORVU.MOREX.r2.6HG0470810

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.6HG0470810
Locus	HORVU.MOREX.r2.6HG0470810.1
URL	Gene Ontology GO:0000900 [ Show all 31 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 33 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta). Functional annotation published with the genome: Sucrose-phosphate synthase GO:0000900; molecular_function; translation repressor activity, mRNA regulatory element binding GO:0003824; molecular_function; catalytic activity GO:0004372; molecular_function; glycine hydroxymethyltransferase activity GO:0005634; cellular_component; nucleus GO:0005737; cellular_component; cytoplasm GO:0005739; cellular_component; mitochondrion GO:0005829; cellular_component; cytosol GO:0006231; biological_process; dTMP biosynthetic process GO:0006544; biological_process; glycine metabolic process GO:0006545; biological_process; glycine biosynthetic process GO:0006563; biological_process; L-serine metabolic process GO:0006565; biological_process; L-serine catabolic process GO:0006730; biological_process; one-carbon metabolic process GO:0008732; molecular_function; L-allo-threonine aldolase activity GO:0009113; biological_process; purine nucleobase biosynthetic process GO:0016597; molecular_function; amino acid binding GO:0016740; molecular_function; transferase activity GO:0017148; biological_process; negative regulation of translation GO:0019264; biological_process; glycine biosynthetic process from serine GO:0030170; molecular_function; pyridoxal phosphate binding GO:0035999; biological_process; tetrahydrofolate interconversion GO:0042802; molecular_function; identical protein binding GO:0042803; molecular_function; protein homodimerization activity GO:0046653; biological_process; tetrahydrofolate metabolic process GO:0046655; biological_process; folic acid metabolic process GO:0048027; molecular_function; mRNA 5'-UTR binding GO:0051262; biological_process; protein tetramerization GO:0051289; biological_process; protein homotetramerization GO:0070905; molecular_function; serine binding GO:1904482; biological_process; cellular response to tetrahydrofolate GO:1990830; biological_process; cellular response to leukemia inhibitory factor
Type	Genomic
Sequence	HORVU.MOREX.r2.6HG0470810.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)