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GrainGenes Probe Report: HORVU.MOREX.r2.6HG0466320

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.6HG0466320
Locus	HORVU.MOREX.r2.6HG0466320.1
URL	Gene Ontology GO:0000166 [ Show all 13 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 15 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Protocadherin Fat 3 GO:0000166; molecular_function; nucleotide binding GO:0001172; biological_process; transcription, RNA-templated GO:0003723; molecular_function; RNA binding GO:0003968; molecular_function; RNA-directed 5'-3' RNA polymerase activity GO:0016032; biological_process; viral process GO:0016740; molecular_function; transferase activity GO:0016779; molecular_function; nucleotidyltransferase activity GO:0019083; biological_process; viral transcription GO:0030430; cellular_component; host cell cytoplasm GO:0039523; biological_process; suppression by virus of host RNA polymerase II activity GO:0039657; biological_process; suppression by virus of host gene expression GO:0039694; biological_process; viral RNA genome replication GO:0042025; cellular_component; host cell nucleus
Type	Genomic
Sequence	HORVU.MOREX.r2.6HG0466320.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)