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GrainGenes Probe Report: HORVU.MOREX.r2.6HG0465700

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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.


Probe
HORVU.MOREX.r2.6HG0465700
Locus
HORVU.MOREX.r2.6HG0465700.1
URL
Gene Ontology GO:0006886
Gene Ontology GO:0006888
Gene Ontology GO:0015031
Gene Ontology GO:0030127
Reference
ReferenceMonat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks
[ Hide all but 1 of 6 ]
Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database).
Functional annotation published with the genome: Aspartate--tRNA ligase
GO:0006886; biological_process; intracellular protein transport
GO:0006888; biological_process; endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0015031; biological_process; protein transport
GO:0030127; cellular_component; COPII vesicle coat
Type
Genomic
Sequence
HORVU.MOREX.r2.6HG0465700.1
Source Species
Hordeum vulgare
Source Germplasm
Morex (barley)