GrainGenes Probe Report: HORVU.MOREX.r2.6HG0464520
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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.
Probe
HORVU.MOREX.r2.6HG0464520
Locus
HORVU.MOREX.r2.6HG0464520.1
URL
Gene Ontology GO:0003677
[ Show all 12 ]
Reference
Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks
[ Hide all but 1 of 14 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Retrotransposon protein, putative, Ty3-gypsy subclass GO:0003677; molecular_function; DNA binding GO:0003700; molecular_function; DNA-binding transcription factor activity GO:0005515; molecular_function; protein binding GO:0005622; cellular_component; intracellular GO:0005634; cellular_component; nucleus GO:0006351; biological_process; transcription, DNA-templated GO:0006355; biological_process; regulation of transcription, DNA-templated GO:0008270; molecular_function; zinc ion binding GO:0009416; biological_process; response to light stimulus GO:0009658; biological_process; chloroplast organization GO:0009909; biological_process; regulation of flower development GO:0046872; molecular_function; metal ion binding
Type
Genomic
Sequence
HORVU.MOREX.r2.6HG0464520.1
Source Species
Hordeum vulgare
Source Germplasm
Morex (barley)
GrainGenes Probe Report: HORVU.MOREX.r2.6HG0464520
[Submit comment/correction][What is a probe?]
Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.
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