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GrainGenes Probe Report: HORVU.MOREX.r2.6HG0460340

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.6HG0460340
Locus	HORVU.MOREX.r2.6HG0460340.1
URL	Gene Ontology GO:0004842 [ Show all 16 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 18 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: F-box family protein GO:0004842; molecular_function; ubiquitin-protein transferase activity GO:0005515; molecular_function; protein binding GO:0005516; molecular_function; calmodulin binding GO:0005634; cellular_component; nucleus GO:0005654; cellular_component; nucleoplasm GO:0005737; cellular_component; cytoplasm GO:0005813; cellular_component; centrosome GO:0005829; cellular_component; cytosol GO:0005856; cellular_component; cytoskeleton GO:0006511; biological_process; ubiquitin-dependent protein catabolic process GO:0008270; molecular_function; zinc ion binding GO:0016020; cellular_component; membrane GO:0016021; cellular_component; integral component of membrane GO:0016567; biological_process; protein ubiquitination GO:0016740; molecular_function; transferase activity GO:0046872; molecular_function; metal ion binding
Type	Genomic
Sequence	HORVU.MOREX.r2.6HG0460340.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)