GrainGenes Probe Report: HORVU.MOREX.r2.6HG0456930
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Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.
Probe
HORVU.MOREX.r2.6HG0456930
Locus
HORVU.MOREX.r2.6HG0456930.1
URL
Gene Ontology GO:0000289
[ Show all 13 ]
Reference
Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks
[ Hide all but 1 of 15 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: F-box protein SKIP22 GO:0000289; biological_process; nuclear-transcribed mRNA poly(A) tail shortening GO:0000932; cellular_component; P-body GO:0003676; molecular_function; nucleic acid binding GO:0004518; molecular_function; nuclease activity GO:0004527; molecular_function; exonuclease activity GO:0004535; molecular_function; poly(A)-specific ribonuclease activity GO:0005737; cellular_component; cytoplasm GO:0006397; biological_process; mRNA processing GO:0016787; molecular_function; hydrolase activity GO:0031251; cellular_component; PAN complex GO:0046872; molecular_function; metal ion binding GO:0090305; biological_process; nucleic acid phosphodiester bond hydrolysis GO:0090503; biological_process; RNA phosphodiester bond hydrolysis, exonucleolytic
Type
Genomic
Sequence
HORVU.MOREX.r2.6HG0456930.1
Source Species
Hordeum vulgare
Source Germplasm
Morex (barley)
GrainGenes Probe Report: HORVU.MOREX.r2.6HG0456930
[Submit comment/correction][What is a probe?]
Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.
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