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GrainGenes Probe Report: HORVU.MOREX.r2.6HG0449640

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.6HG0449640
Locus	HORVU.MOREX.r2.6HG0449640.1
URL	Gene Ontology GO:0000166 [ Show all 73 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 75 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Topless-related protein 2 GO:0000166; molecular_function; nucleotide binding GO:0001965; molecular_function; G-protein alpha-subunit binding GO:0003230; biological_process; cardiac atrium development GO:0004672; molecular_function; protein kinase activity GO:0004713; molecular_function; protein tyrosine kinase activity GO:0004714; molecular_function; transmembrane receptor protein tyrosine kinase activity GO:0005010; molecular_function; insulin-like growth factor-activated receptor activity GO:0005515; molecular_function; protein binding GO:0005520; molecular_function; insulin-like growth factor binding GO:0005524; molecular_function; ATP binding GO:0005634; cellular_component; nucleus GO:0005737; cellular_component; cytoplasm GO:0005886; cellular_component; plasma membrane GO:0005901; cellular_component; caveola GO:0006468; biological_process; protein phosphorylation GO:0007169; biological_process; transmembrane receptor protein tyrosine kinase signaling pathway GO:0007409; biological_process; axonogenesis GO:0007568; biological_process; aging GO:0008286; biological_process; insulin receptor signaling pathway GO:0010656; biological_process; negative regulation of muscle cell apoptotic process GO:0014068; biological_process; positive regulation of phosphatidylinositol 3-kinase signaling GO:0016020; cellular_component; membrane GO:0016021; cellular_component; integral component of membrane GO:0016301; molecular_function; kinase activity GO:0016310; biological_process; phosphorylation GO:0016740; molecular_function; transferase activity GO:0018108; biological_process; peptidyl-tyrosine phosphorylation GO:0021549; biological_process; cerebellum development GO:0021766; biological_process; hippocampus development GO:0030010; biological_process; establishment of cell polarity GO:0030315; cellular_component; T-tubule GO:0030424; cellular_component; axon GO:0031175; biological_process; neuron projection development GO:0031667; biological_process; response to nutrient levels GO:0032467; biological_process; positive regulation of cytokinesis GO:0032868; biological_process; response to insulin GO:0032869; biological_process; cellular response to insulin stimulus GO:0033197; biological_process; response to vitamin E GO:0033690; biological_process; positive regulation of osteoblast proliferation GO:0035094; biological_process; response to nicotine GO:0043005; cellular_component; neuron projection GO:0043025; cellular_component; neuronal cell body GO:0043066; biological_process; negative regulation of apoptotic process GO:0043243; biological_process; positive regulation of protein-containing complex disassembly GO:0043548; molecular_function; phosphatidylinositol 3-kinase binding GO:0043560; molecular_function; insulin receptor substrate binding GO:0044849; biological_process; estrous cycle GO:0045471; biological_process; response to ethanol GO:0046328; biological_process; regulation of JNK cascade GO:0046777; biological_process; protein autophosphorylation GO:0048009; biological_process; insulin-like growth factor receptor signaling pathway GO:0048661; biological_process; positive regulation of smooth muscle cell proliferation GO:0048680; biological_process; positive regulation of axon regeneration GO:0051054; biological_process; positive regulation of DNA metabolic process GO:0051262; biological_process; protein tetramerization GO:0051291; biological_process; protein heterooligomerization GO:0051389; biological_process; inactivation of MAPKK activity GO:0071260; biological_process; cellular response to mechanical stimulus GO:0071333; biological_process; cellular response to glucose stimulus GO:0071392; biological_process; cellular response to estradiol stimulus GO:0071393; biological_process; cellular response to progesterone stimulus GO:0071394; biological_process; cellular response to testosterone stimulus GO:0071549; biological_process; cellular response to dexamethasone stimulus GO:0071560; biological_process; cellular response to transforming growth factor beta stimulus GO:0090031; biological_process; positive regulation of steroid hormone biosynthetic process GO:0090398; biological_process; cellular senescence GO:0097062; biological_process; dendritic spine maintenance GO:1902065; biological_process; response to L-glutamate GO:1903944; biological_process; negative regulation of hepatocyte apoptotic process GO:1904045; biological_process; cellular response to aldosterone GO:1904193; biological_process; negative regulation of cholangiocyte apoptotic process GO:1904385; biological_process; cellular response to angiotensin GO:1990314; biological_process; cellular response to insulin-like growth factor stimulus
Type	Genomic
Sequence	HORVU.MOREX.r2.6HG0449640.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)