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GrainGenes Probe Report: HORVU.MOREX.r2.5HG0446870

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.5HG0446870
Locus	HORVU.MOREX.r2.5HG0446870.1
URL	Gene Ontology GO:0001809 [ Show all 36 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 38 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Clampless protein 1 GO:0001809; biological_process; positive regulation of type IV hypersensitivity GO:0001825; biological_process; blastocyst formation GO:0002455; biological_process; humoral immune response mediated by circulating immunoglobulin GO:0002687; biological_process; positive regulation of leukocyte migration GO:0002922; biological_process; positive regulation of humoral immune response GO:0005515; molecular_function; protein binding GO:0005576; cellular_component; extracellular region GO:0005615; cellular_component; extracellular space GO:0005622; cellular_component; intracellular GO:0005886; cellular_component; plasma membrane GO:0007339; biological_process; binding of sperm to zona pellucida GO:0010469; biological_process; regulation of signaling receptor activity GO:0010513; biological_process; positive regulation of phosphatidylinositol biosynthetic process GO:0016020; cellular_component; membrane GO:0016021; cellular_component; integral component of membrane GO:0030246; molecular_function; carbohydrate binding GO:0031012; cellular_component; extracellular matrix GO:0032190; molecular_function; acrosin binding GO:0032729; biological_process; positive regulation of interferon-gamma production GO:0032753; biological_process; positive regulation of interleukin-4 production GO:0035803; biological_process; egg coat formation GO:0035804; molecular_function; structural constituent of egg coat GO:0042102; biological_process; positive regulation of T cell proliferation GO:0042802; molecular_function; identical protein binding GO:0045892; biological_process; negative regulation of transcription, DNA-templated GO:0045893; biological_process; positive regulation of transcription, DNA-templated GO:0048015; biological_process; phosphatidylinositol-mediated signaling GO:0048018; molecular_function; receptor ligand activity GO:0048599; biological_process; oocyte development GO:0050729; biological_process; positive regulation of inflammatory response GO:0090280; biological_process; positive regulation of calcium ion import GO:2000344; biological_process; positive regulation of acrosome reaction GO:2000360; biological_process; negative regulation of binding of sperm to zona pellucida GO:2000368; biological_process; positive regulation of acrosomal vesicle exocytosis GO:2000386; biological_process; positive regulation of ovarian follicle development GO:2000388; biological_process; positive regulation of antral ovarian follicle growth
Type	Genomic
Sequence	HORVU.MOREX.r2.5HG0446870.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)