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GrainGenes Probe Report: HORVU.MOREX.r2.5HG0441780

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.5HG0441780
Locus	HORVU.MOREX.r2.5HG0441780.1
URL	Gene Ontology GO:0000278 [ Show all 28 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 30 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Eukaryotic aspartyl protease family protein, putative GO:0000278; biological_process; mitotic cell cycle GO:0000776; cellular_component; kinetochore GO:0004857; molecular_function; enzyme inhibitor activity GO:0004871; molecular_function; obsolete signal transducer activity GO:0005515; molecular_function; protein binding GO:0005654; cellular_component; nucleoplasm GO:0005737; cellular_component; cytoplasm GO:0005813; cellular_component; centrosome GO:0005829; cellular_component; cytosol GO:0005925; cellular_component; focal adhesion GO:0006470; biological_process; protein dephosphorylation GO:0007098; biological_process; centrosome cycle GO:0007165; biological_process; signal transduction GO:0015629; cellular_component; actin cytoskeleton GO:0019208; molecular_function; phosphatase regulator activity GO:0019901; molecular_function; protein kinase binding GO:0030018; cellular_component; Z disc GO:0030155; biological_process; regulation of cell adhesion GO:0031672; cellular_component; A band GO:0035507; biological_process; regulation of myosin-light-chain-phosphatase activity GO:0035508; biological_process; positive regulation of myosin-light-chain-phosphatase activity GO:0035690; biological_process; cellular response to drug GO:0043086; biological_process; negative regulation of catalytic activity GO:0043292; cellular_component; contractile fiber GO:0045944; biological_process; positive regulation of transcription by RNA polymerase II GO:0046822; biological_process; regulation of nucleocytoplasmic transport GO:0071889; molecular_function; 14-3-3 protein binding GO:0072357; cellular_component; PTW/PP1 phosphatase complex
Type	Genomic
Sequence	HORVU.MOREX.r2.5HG0441780.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)