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GrainGenes Probe Report: HORVU.MOREX.r2.5HG0433720

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.5HG0433720
Locus	HORVU.MOREX.r2.5HG0433720.1
URL	Gene Ontology GO:0072556 [ Show all 18 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 21 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Histidine kinase, putative GO:0044231; cellular_component; host cell presynaptic membrane The GO term GO:0072556 was intially assigned to this transcript and is now obsolete. It has been replaced by: GO:0044231 GO:0004623; molecular_function; phospholipase A2 activity GO:0005509; molecular_function; calcium ion binding GO:0005576; cellular_component; extracellular region GO:0006629; biological_process; lipid metabolic process GO:0006644; biological_process; phospholipid metabolic process GO:0006937; biological_process; regulation of muscle contraction GO:0009395; biological_process; phospholipid catabolic process GO:0009405; biological_process; pathogenesis GO:0016042; biological_process; lipid catabolic process GO:0016787; molecular_function; hydrolase activity GO:0019835; biological_process; cytolysis GO:0046872; molecular_function; metal ion binding GO:0050482; biological_process; arachidonic acid secretion GO:0051715; biological_process; cytolysis in other organism GO:0090729; molecular_function; toxin activity GO:0102567; molecular_function; phospholipase A2 activity (consuming 1, 2-dipalmitoylphosphatidylcholine) GO:0102568; molecular_function; phospholipase A2 activity consuming 1, 2-dioleoylphosphatidylethanolamine)
Type	Genomic
Sequence	HORVU.MOREX.r2.5HG0433720.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)