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GrainGenes Probe Report: HORVU.MOREX.r2.5HG0433650

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.5HG0433650
Locus	HORVU.MOREX.r2.5HG0433650.1
URL	Gene Ontology GO:0000166 [ Show all 20 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 22 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC1: Complete protein with subject and query coverage above the BLAST threshold in the UniMag database (validated proteins from Magnoliophyta). Functional annotation published with the genome: Aspartic proteinase nepenthesin-1 GO:0000166; molecular_function; nucleotide binding GO:0003677; molecular_function; DNA binding GO:0003678; molecular_function; DNA helicase activity GO:0004386; molecular_function; helicase activity GO:0004518; molecular_function; nuclease activity GO:0004519; molecular_function; endonuclease activity GO:0005515; molecular_function; protein binding GO:0005524; molecular_function; ATP binding GO:0005618; cellular_component; cell wall GO:0005829; cellular_component; cytosol GO:0006260; biological_process; DNA replication GO:0006268; biological_process; DNA unwinding involved in DNA replication GO:0006269; biological_process; DNA replication, synthesis of RNA primer GO:0006314; biological_process; intron homing GO:0006974; biological_process; cellular response to DNA damage stimulus GO:0016539; biological_process; intein-mediated protein splicing GO:0016787; molecular_function; hydrolase activity GO:0040007; biological_process; growth GO:0090305; biological_process; nucleic acid phosphodiester bond hydrolysis GO:1990077; cellular_component; primosome complex
Type	Genomic
Sequence	HORVU.MOREX.r2.5HG0433650.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)