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GrainGenes Probe Report: HORVU.MOREX.r2.5HG0432710

[Submit comment/correction][What is a probe?]Probes originated as records of the single stranded molecules used in RFLP mapping. This term has expanded to include PCR primers and SNPs.

Note: Probe report page includes probe information, gene models, PCR Primers, and SNPs.

Probe	HORVU.MOREX.r2.5HG0432710
Locus	HORVU.MOREX.r2.5HG0432710.1
URL	Gene Ontology GO:0002102 [ Show all 30 ]
Reference	Monat C et al. (2019) TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools Genome Biology 20:284.
General Remarks	[ Hide all but 1 of 32 ] Confidence level 1 = HC: High Confidence. Confidence level 2 = HC2: Complete protein with a BLAST hit in UniPoa (validated proteins from Poaceae), but no BLAST hit in UniMag (validated proteins from Magnoliophyta) or TREP (Triticeae REPetitive elements database). Functional annotation published with the genome: Sec14p-like phosphatidylinositol transfer family protein GO:0002102; cellular_component; podosome GO:0002446; biological_process; neutrophil mediated immunity GO:0003779; molecular_function; actin binding GO:0005737; cellular_component; cytoplasm GO:0005856; cellular_component; cytoskeleton GO:0005884; cellular_component; actin filament GO:0005886; cellular_component; plasma membrane GO:0005911; cellular_component; cell-cell junction GO:0007605; biological_process; sensory perception of sound GO:0008360; biological_process; regulation of cell shape GO:0015629; cellular_component; actin cytoskeleton GO:0030036; biological_process; actin cytoskeleton organization GO:0030043; biological_process; actin filament fragmentation GO:0030054; cellular_component; cell junction GO:0030220; biological_process; platelet formation GO:0030834; biological_process; regulation of actin filament depolymerization GO:0030836; biological_process; positive regulation of actin filament depolymerization GO:0030864; cellular_component; cortical actin cytoskeleton GO:0030865; biological_process; cortical cytoskeleton organization GO:0042247; biological_process; establishment of planar polarity of follicular epithelium GO:0042643; cellular_component; actomyosin, actin portion GO:0042995; cellular_component; cell projection GO:0043209; cellular_component; myelin sheath GO:0043297; biological_process; apical junction assembly GO:0045199; biological_process; maintenance of epithelial cell apical/basal polarity GO:0045214; biological_process; sarcomere organization GO:0048713; biological_process; regulation of oligodendrocyte differentiation GO:0051015; molecular_function; actin filament binding GO:0060307; biological_process; regulation of ventricular cardiac muscle cell membrane repolarization GO:1990266; biological_process; neutrophil migration
Type	Genomic
Sequence	HORVU.MOREX.r2.5HG0432710.1
Source Species	Hordeum vulgare
Source Germplasm	Morex (barley)